Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim44Q9QXA7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim44Q9QXA7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim44Q9QXA7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim44Q9QXA7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trim44Q9QXA7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim44Q9QXA7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim44Q9QXA7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim44Q9QXA7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim44Q9QXA7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms