Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Psmb5-202ENSMUST00000227257 622 ntBASIC13.62□□□□□ -0.23
Crlf1Q9JM58 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Crlf1Q9JM58 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Crlf1Q9JM58 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Crlf1Q9JM58 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.62□□□□□ -0.23
Crlf1Q9JM58 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Crlf1Q9JM58 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Gm24513-201ENSMUST00000174964 138 ntBASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Gm27397-201ENSMUST00000184997 107 ntBASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crlf1Q9JM58 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crlf1Q9JM58 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crlf1Q9JM58 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Crlf1Q9JM58 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Crlf1Q9JM58 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Crlf1Q9JM58 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Crlf1Q9JM58 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Crlf1Q9JM58 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Crlf1Q9JM58 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Crlf1Q9JM58 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Crlf1Q9JM58 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Crlf1Q9JM58 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms