Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn5aQ9JJV9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scn5aQ9JJV9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn5aQ9JJV9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.52■□□□□ 0.39
Scn5aQ9JJV9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn5aQ9JJV9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.5■□□□□ 0.39
Scn5aQ9JJV9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn5aQ9JJV9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn5aQ9JJV9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms