Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Copb1Q9JIF7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Gm12441-201ENSMUST00000121806 588 ntBASIC18.61■□□□□ 0.57
Copb1Q9JIF7 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Gm43183-201ENSMUST00000200632 547 ntBASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Copb1Q9JIF7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Gm18666-201ENSMUST00000190039 958 ntBASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Copb1Q9JIF7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Copb1Q9JIF7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Copb1Q9JIF7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Copb1Q9JIF7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
Copb1Q9JIF7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Copb1Q9JIF7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Copb1Q9JIF7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Copb1Q9JIF7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.58■□□□□ 0.56
Copb1Q9JIF7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Copb1Q9JIF7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms