Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ube4bQ9ES00 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ube4bQ9ES00 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4bQ9ES00 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.38■□□□□ 0.21
Ube4bQ9ES00 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4bQ9ES00 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4bQ9ES00 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Gm13146-201ENSMUST00000118508 780 ntBASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Reep4-203ENSMUST00000226563 1444 ntBASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4bQ9ES00 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms