Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb3Q9ERD7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb3Q9ERD7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tubb3Q9ERD7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.9■□□□□ 0.3
Tubb3Q9ERD7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb3Q9ERD7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tubb3Q9ERD7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Tubb3Q9ERD7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tubb3Q9ERD7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb3Q9ERD7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.88■□□□□ 0.29
Tubb3Q9ERD7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Gm13401-201ENSMUST00000117074 291 ntBASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Mir2861-201ENSMUST00000175539 82 ntBASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb3Q9ERD7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubb3Q9ERD7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Gm10418-201ENSMUST00000100943 576 ntBASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tubb3Q9ERD7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms