Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-4Q9EQM3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Gm23935-201ENSMUST00000102303 57 ntBASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Gm24270-201ENSMUST00000102326 57 ntBASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Gm24245-201ENSMUST00000157318 57 ntBASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-4Q9EQM3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-4Q9EQM3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Gm12260-201ENSMUST00000122447 411 ntBASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Psmb5-202ENSMUST00000227257 622 ntBASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-4Q9EQM3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx2-4Q9EQM3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx2-4Q9EQM3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Nkx2-4Q9EQM3 Iqck-206ENSMUST00000208658 2891 ntBASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Gm2756-201ENSMUST00000195851 400 ntBASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.39■□□□□ 0.37
Nkx2-4Q9EQM3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms