Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps35Q9EQH3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Vps35Q9EQH3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps35Q9EQH3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps35Q9EQH3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Vps35Q9EQH3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps35Q9EQH3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps35Q9EQH3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17■□□□□ 0.31
Vps35Q9EQH3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps35Q9EQH3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17■□□□□ 0.31
Vps35Q9EQH3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17■□□□□ 0.31
Vps35Q9EQH3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Vps35Q9EQH3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps35Q9EQH3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps35Q9EQH3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps35Q9EQH3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Gm15565-201ENSMUST00000118890 427 ntBASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps35Q9EQH3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Il3ra-202ENSMUST00000223589 738 ntBASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Vps35Q9EQH3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms