Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf1Q9EPU0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upf1Q9EPU0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.33■□□□□ 0.69
Upf1Q9EPU0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
Upf1Q9EPU0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upf1Q9EPU0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Upf1Q9EPU0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Upf1Q9EPU0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Gm5312-201ENSMUST00000203728 547 ntBASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Tgds-204ENSMUST00000228543 1594 ntBASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upf1Q9EPU0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Mir1895-201ENSMUST00000122615 79 ntBASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Mir6977-201ENSMUST00000184960 64 ntBASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Upf1Q9EPU0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Gm12428-201ENSMUST00000119844 727 ntBASIC19.29■□□□□ 0.68
Upf1Q9EPU0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms