Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp8Q9DB85 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Gm5864-201ENSMUST00000202263 970 ntBASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp8Q9DB85 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Mir8098-201ENSMUST00000184011 137 ntBASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Gm43347-201ENSMUST00000200226 580 ntBASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rrp8Q9DB85 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Gm12895-201ENSMUST00000122214 226 ntBASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Gm6443-201ENSMUST00000203599 874 ntBASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rrp8Q9DB85 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Gm27000-201ENSMUST00000182943 842 ntBASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Gm27459-201ENSMUST00000184860 107 ntBASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Gm43514-201ENSMUST00000198852 424 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms