Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Gm27463-201ENSMUST00000183569 57 ntBASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp2aQ9DB34 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Gm9731-201ENSMUST00000209480 747 ntBASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2aQ9DB34 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2aQ9DB34 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2aQ9DB34 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Gm13559-201ENSMUST00000120476 863 ntBASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms