Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3c6Q9D8P7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Gm22240-201ENSMUST00000175225 82 ntBASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3c6Q9D8P7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Gm27011-201ENSMUST00000182352 972 ntBASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3c6Q9D8P7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3c6Q9D8P7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Gm21814-202ENSMUST00000203277 873 ntBASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3c6Q9D8P7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Gm3375-201ENSMUST00000203929 796 ntBASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3c6Q9D8P7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf3c6Q9D8P7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf3c6Q9D8P7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gtf3c6Q9D8P7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms