Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nop56Q9D6Z1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nop56Q9D6Z1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Gm6365-201ENSMUST00000054711 744 ntBASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nop56Q9D6Z1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Gm7291-201ENSMUST00000199147 382 ntBASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Zfp783-201ENSMUST00000095946 670 ntBASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nop56Q9D6Z1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nop56Q9D6Z1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nop56Q9D6Z1 Gm13401-201ENSMUST00000117074 291 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms