Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Gm5812-201ENSMUST00000061073 957 ntBASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ShpkQ9D5J6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShpkQ9D5J6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Gm29791-202ENSMUST00000207888 369 ntBASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShpkQ9D5J6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ShpkQ9D5J6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.23□□□□□ -0.13
ShpkQ9D5J6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms