Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Il3ra-202ENSMUST00000223589 738 ntBASIC18.2■□□□□ 0.5
Mms19Q9D071 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mms19Q9D071 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Mms19Q9D071 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mms19Q9D071 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Mms19Q9D071 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.2■□□□□ 0.5
Mms19Q9D071 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mms19Q9D071 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.2■□□□□ 0.5
Mms19Q9D071 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Mms19Q9D071 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mms19Q9D071 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mms19Q9D071 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.19■□□□□ 0.5
Mms19Q9D071 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Mms19Q9D071 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.19■□□□□ 0.5
Mms19Q9D071 Gm17661-201ENSMUST00000170317 270 ntBASIC18.19■□□□□ 0.5
Mms19Q9D071 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Mms19Q9D071 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.19■□□□□ 0.5
Mms19Q9D071 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mms19Q9D071 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.18■□□□□ 0.5
Mms19Q9D071 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Mms19Q9D071 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.18■□□□□ 0.5
Mms19Q9D071 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Mms19Q9D071 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.18■□□□□ 0.5
Mms19Q9D071 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.18■□□□□ 0.5
Mms19Q9D071 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.18■□□□□ 0.5
Mms19Q9D071 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Gm18959-201ENSMUST00000208954 655 ntBASIC18.18■□□□□ 0.5
Mms19Q9D071 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.18■□□□□ 0.5
Mms19Q9D071 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.18■□□□□ 0.5
Mms19Q9D071 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Mms19Q9D071 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mms19Q9D071 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.17■□□□□ 0.5
Mms19Q9D071 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mms19Q9D071 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.17■□□□□ 0.5
Mms19Q9D071 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mms19Q9D071 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.17■□□□□ 0.5
Mms19Q9D071 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.17■□□□□ 0.5
Mms19Q9D071 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mms19Q9D071 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Mms19Q9D071 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Mms19Q9D071 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mms19Q9D071 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Mms19Q9D071 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mms19Q9D071 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mms19Q9D071 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mms19Q9D071 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mms19Q9D071 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mms19Q9D071 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Mms19Q9D071 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Mms19Q9D071 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mms19Q9D071 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mms19Q9D071 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.15■□□□□ 0.5
Mms19Q9D071 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.15■□□□□ 0.5
Mms19Q9D071 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Gm45058-201ENSMUST00000205810 766 ntBASIC18.15■□□□□ 0.5
Mms19Q9D071 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms