Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Khdc3Q9CWU5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc3Q9CWU5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Gm12085-201ENSMUST00000119263 940 ntBASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc3Q9CWU5 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc3Q9CWU5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc3Q9CWU5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc3Q9CWU5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.28■□□□□ 0.2
Khdc3Q9CWU5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms