Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf135Q9CWS1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf135Q9CWS1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf135Q9CWS1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf135Q9CWS1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf135Q9CWS1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf135Q9CWS1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf135Q9CWS1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf135Q9CWS1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf135Q9CWS1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf135Q9CWS1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf135Q9CWS1 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Gm4974-201ENSMUST00000209974 875 ntBASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.67■□□□□ 0.42
Rnf135Q9CWS1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Gm12382-201ENSMUST00000122005 922 ntBASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf135Q9CWS1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms