Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Gm45328-201ENSMUST00000210942 917 ntBASIC16.34■□□□□ 0.21
Msantd3Q9CR78 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msantd3Q9CR78 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msantd3Q9CR78 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msantd3Q9CR78 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msantd3Q9CR78 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msantd3Q9CR78 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msantd3Q9CR78 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Mir3081-201ENSMUST00000175305 84 ntBASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msantd3Q9CR78 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Gm6623-201ENSMUST00000173570 544 ntBASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Gm37722-201ENSMUST00000193757 208 ntBASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.32■□□□□ 0.2
Msantd3Q9CR78 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msantd3Q9CR78 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Mir8112-201ENSMUST00000184382 131 ntBASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msantd3Q9CR78 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Msantd3Q9CR78 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.3■□□□□ 0.2
Msantd3Q9CR78 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Msantd3Q9CR78 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Msantd3Q9CR78 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Msantd3Q9CR78 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msantd3Q9CR78 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msantd3Q9CR78 Gm27742-201ENSMUST00000184667 60 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms