Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg3Q9CQV4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg3Q9CQV4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Gm27463-201ENSMUST00000183569 57 ntBASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.09■□□□□ 0.33
Retreg3Q9CQV4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.08■□□□□ 0.33
Retreg3Q9CQV4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retreg3Q9CQV4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Retreg3Q9CQV4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.08■□□□□ 0.33
Retreg3Q9CQV4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retreg3Q9CQV4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg3Q9CQV4 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.07■□□□□ 0.32
Retreg3Q9CQV4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg3Q9CQV4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Gm7370-201ENSMUST00000219471 767 ntBASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg3Q9CQV4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms