Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34aQ99PP6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Gm44771-201ENSMUST00000206975 626 ntBASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim34aQ99PP6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Trim34aQ99PP6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Trim34aQ99PP6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trim34aQ99PP6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trim34aQ99PP6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34aQ99PP6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Mzt1-203ENSMUST00000227948 952 ntBASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34aQ99PP6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Gm12895-201ENSMUST00000122214 226 ntBASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34aQ99PP6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34aQ99PP6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim34aQ99PP6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34aQ99PP6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34aQ99PP6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim34aQ99PP6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim34aQ99PP6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34aQ99PP6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34aQ99PP6 Gm28659-201ENSMUST00000188013 759 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms