Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cntnap4Q99P47 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntnap4Q99P47 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Gm11355-201ENSMUST00000121120 306 ntBASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Gm27000-201ENSMUST00000182943 842 ntBASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Gm29518-201ENSMUST00000190858 372 ntBASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntnap4Q99P47 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cntnap4Q99P47 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Gm17808-201ENSMUST00000200859 894 ntBASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Mzt1-203ENSMUST00000227948 952 ntBASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cntnap4Q99P47 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms