Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap3Q99LM2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Gm20049-201ENSMUST00000219950 730 ntBASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdk5rap3Q99LM2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap3Q99LM2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Gm10517-202ENSMUST00000192970 758 ntBASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.6■□□□□ 0.41
Cdk5rap3Q99LM2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap3Q99LM2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk5rap3Q99LM2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk5rap3Q99LM2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk5rap3Q99LM2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.58■□□□□ 0.41
Cdk5rap3Q99LM2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk5rap3Q99LM2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk5rap3Q99LM2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdk5rap3Q99LM2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk5rap3Q99LM2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk5rap3Q99LM2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.58■□□□□ 0.4
Cdk5rap3Q99LM2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.58■□□□□ 0.4
Cdk5rap3Q99LM2 Gm24841-201ENSMUST00000158676 357 ntBASIC17.58■□□□□ 0.4
Cdk5rap3Q99LM2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk5rap3Q99LM2 Gm18666-201ENSMUST00000190039 958 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms