Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Lysmd3Q99LE3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Gm10566-201ENSMUST00000086739 996 ntBASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd3Q99LE3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd3Q99LE3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 AA414768-201ENSMUST00000121924 1257 ntBASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Gm27000-201ENSMUST00000182943 842 ntBASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd3Q99LE3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd3Q99LE3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.6■□□□□ 0.41
Lysmd3Q99LE3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd3Q99LE3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd3Q99LE3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.6■□□□□ 0.41
Lysmd3Q99LE3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lysmd3Q99LE3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd3Q99LE3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms