Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.16■□□□□ 0.34
Cdk9Q99J95 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Gm29257-201ENSMUST00000186115 639 ntBASIC17.15■□□□□ 0.34
Cdk9Q99J95 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Gm29791-202ENSMUST00000207888 369 ntBASIC17.15■□□□□ 0.34
Cdk9Q99J95 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk9Q99J95 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdk9Q99J95 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdk9Q99J95 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdk9Q99J95 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Cdk9Q99J95 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.14■□□□□ 0.33
Cdk9Q99J95 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk9Q99J95 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Mir8112-201ENSMUST00000184382 131 ntBASIC17.13■□□□□ 0.33
Cdk9Q99J95 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdk9Q99J95 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk9Q99J95 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk9Q99J95 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms