Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc4Q99J62 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.55■□□□□ 0.72
Rfc4Q99J62 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.55■□□□□ 0.72
Rfc4Q99J62 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfc4Q99J62 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.54■□□□□ 0.72
Rfc4Q99J62 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.54■□□□□ 0.72
Rfc4Q99J62 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfc4Q99J62 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfc4Q99J62 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rfc4Q99J62 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rfc4Q99J62 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rfc4Q99J62 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Rfc4Q99J62 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Gm5867-201ENSMUST00000063197 592 ntBASIC19.51■□□□□ 0.71
Rfc4Q99J62 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfc4Q99J62 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms