Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd1Q99J36 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.18■□□□□ 0.02
Thumpd1Q99J36 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Thumpd1Q99J36 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Gm10138-203ENSMUST00000206952 366 ntBASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd1Q99J36 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Gm6576-201ENSMUST00000169678 883 ntBASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thumpd1Q99J36 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.14■□□□□ 0.01
Thumpd1Q99J36 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Gm26524-201ENSMUST00000192339 390 ntBASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms