Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha11Q91Y19 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha11Q91Y19 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Gm6659-201ENSMUST00000174752 547 ntBASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Gm27389-201ENSMUST00000183622 195 ntBASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdha11Q91Y19 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Gm27000-201ENSMUST00000182943 842 ntBASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdha11Q91Y19 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdha11Q91Y19 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.83■□□□□ 0.45
Pcdha11Q91Y19 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha11Q91Y19 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms