Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha3Q91Y16 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha3Q91Y16 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha3Q91Y16 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha3Q91Y16 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdha3Q91Y16 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha3Q91Y16 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdha3Q91Y16 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Gm43799-201ENSMUST00000201845 579 ntBASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha3Q91Y16 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Gm6433-201ENSMUST00000118634 875 ntBASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Gm7638-201ENSMUST00000121348 967 ntBASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha3Q91Y16 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Gm9731-201ENSMUST00000209480 747 ntBASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha3Q91Y16 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Gm11539-201ENSMUST00000119837 557 ntBASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Gm13436-201ENSMUST00000120418 567 ntBASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Gm13559-201ENSMUST00000120476 863 ntBASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdha3Q91Y16 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms