Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha9Q91Y11 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha9Q91Y11 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Pcdha9Q91Y11 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.08■□□□□ 0.48
Pcdha9Q91Y11 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha9Q91Y11 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Gm45058-201ENSMUST00000205810 766 ntBASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Gm18959-201ENSMUST00000208954 655 ntBASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pcdha9Q91Y11 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha9Q91Y11 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Mir5130-201ENSMUST00000175160 84 ntBASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha9Q91Y11 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdha9Q91Y11 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms