Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Gm43037-201ENSMUST00000196808 250 ntBASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 CT010431.1-201ENSMUST00000221249 1080 ntBASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhb20Q91XZ9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Gm28877-201ENSMUST00000191349 604 ntBASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Gm18101-201ENSMUST00000215769 548 ntBASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb20Q91XZ9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb20Q91XZ9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb20Q91XZ9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms