Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Gm11434-201ENSMUST00000122379 629 ntBASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Gm14026-201ENSMUST00000120625 1789 ntBASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb3Q91XZ7 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Gm20049-201ENSMUST00000219950 730 ntBASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb3Q91XZ7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb3Q91XZ7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb3Q91XZ7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms