Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Gm13401-201ENSMUST00000117074 291 ntBASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Gm38027-201ENSMUST00000192315 235 ntBASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga4Q91XY4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Gm13836-201ENSMUST00000121159 501 ntBASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga4Q91XY4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Gm6433-201ENSMUST00000118634 875 ntBASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga4Q91XY4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Gm12085-201ENSMUST00000119263 940 ntBASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.71■□□□□ 0.27
Pcdhga4Q91XY4 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhga4Q91XY4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms