Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgc3Q91XX1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgc3Q91XX1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgc3Q91XX1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgc3Q91XX1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgc3Q91XX1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhgc3Q91XX1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgc3Q91XX1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgc3Q91XX1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms