Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Gm7153-201ENSMUST00000117092 455 ntBASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Mir1668-201ENSMUST00000184114 107 ntBASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhgc5Q91XW9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc5Q91XW9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc5Q91XW9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc5Q91XW9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc5Q91XW9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgc5Q91XW9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhgc5Q91XW9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgc5Q91XW9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Gm44771-201ENSMUST00000206975 626 ntBASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdhgc5Q91XW9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgc5Q91XW9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Gm10566-201ENSMUST00000086739 996 ntBASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgc5Q91XW9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgc5Q91XW9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms