Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Gm7791-201ENSMUST00000219066 539 ntBASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Dancr-204ENSMUST00000132389 2347 ntBASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Gm10013-201ENSMUST00000106074 672 ntBASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx41Q91VN6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Gm23634-201ENSMUST00000175071 91 ntBASIC19.47■□□□□ 0.71
Ddx41Q91VN6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx41Q91VN6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx41Q91VN6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx41Q91VN6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx41Q91VN6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms