Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm13836-201ENSMUST00000121159 501 ntBASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Gm16061-201ENSMUST00000122167 857 ntBASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Gm37436-201ENSMUST00000193842 1085 ntBASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Gm9987-201ENSMUST00000069768 567 ntBASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Gm27000-201ENSMUST00000182943 842 ntBASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.63■□□□□ 0.41
Pcdhb17Q91VD8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Gm45058-201ENSMUST00000205810 766 ntBASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb17Q91VD8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Gm18351-201ENSMUST00000188646 883 ntBASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb17Q91VD8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Gm18959-201ENSMUST00000208954 655 ntBASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb17Q91VD8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms