Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H1fooQ8VIK3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Gm24841-201ENSMUST00000158676 357 ntBASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
H1fooQ8VIK3 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H1fooQ8VIK3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Gm13168-201ENSMUST00000121771 632 ntBASIC14.23□□□□□ -0.13
H1fooQ8VIK3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.23□□□□□ -0.13
H1fooQ8VIK3 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H1fooQ8VIK3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms