Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Gm5643-201ENSMUST00000117081 966 ntBASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm1Q8VC85 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Gm17661-201ENSMUST00000170317 270 ntBASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm1Q8VC85 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm1Q8VC85 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Gm37025-201ENSMUST00000195159 829 ntBASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.27■□□□□ 0.2
Lsm1Q8VC85 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms