Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.05■□□□□ 0.32
Vps39Q8R5L3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps39Q8R5L3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps39Q8R5L3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vps39Q8R5L3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps39Q8R5L3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps39Q8R5L3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vps39Q8R5L3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.02■□□□□ 0.32
Vps39Q8R5L3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps39Q8R5L3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps39Q8R5L3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.02■□□□□ 0.31
Vps39Q8R5L3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Vps39Q8R5L3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.01■□□□□ 0.31
Vps39Q8R5L3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps39Q8R5L3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps39Q8R5L3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17■□□□□ 0.31
Vps39Q8R5L3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps39Q8R5L3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17■□□□□ 0.31
Vps39Q8R5L3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17■□□□□ 0.31
Vps39Q8R5L3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vps39Q8R5L3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17■□□□□ 0.31
Vps39Q8R5L3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17■□□□□ 0.31
Vps39Q8R5L3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps39Q8R5L3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps39Q8R5L3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17■□□□□ 0.31
Vps39Q8R5L3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps39Q8R5L3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps39Q8R5L3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17■□□□□ 0.31
Vps39Q8R5L3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vps39Q8R5L3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps39Q8R5L3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms