Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slf1Q8R3P9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Slf1Q8R3P9 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.21■□□□□ 0.34
Slf1Q8R3P9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slf1Q8R3P9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slf1Q8R3P9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms