Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brd8Q8R3B7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Mir1668-201ENSMUST00000184114 107 ntBASIC17.35■□□□□ 0.37
Brd8Q8R3B7 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brd8Q8R3B7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Gm27000-201ENSMUST00000182943 842 ntBASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brd8Q8R3B7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Brd8Q8R3B7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.33■□□□□ 0.36
Brd8Q8R3B7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Brd8Q8R3B7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brd8Q8R3B7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brd8Q8R3B7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Brd8Q8R3B7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.32■□□□□ 0.36
Brd8Q8R3B7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Brd8Q8R3B7 Gm18101-201ENSMUST00000215769 548 ntBASIC17.32■□□□□ 0.36
Brd8Q8R3B7 Gm7213-201ENSMUST00000215977 950 ntBASIC17.32■□□□□ 0.36
Brd8Q8R3B7 Gm18032-201ENSMUST00000222541 538 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms