Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln1Q8R317 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln1Q8R317 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ubqln1Q8R317 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Mir5122-201ENSMUST00000175004 89 ntBASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln1Q8R317 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Gm7638-201ENSMUST00000121348 967 ntBASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Gm9731-201ENSMUST00000209480 747 ntBASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln1Q8R317 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Gm3375-201ENSMUST00000203929 796 ntBASIC16.09■□□□□ 0.17
Ubqln1Q8R317 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubqln1Q8R317 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ubqln1Q8R317 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.08■□□□□ 0.17
Ubqln1Q8R317 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ubqln1Q8R317 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ubqln1Q8R317 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.08■□□□□ 0.17
Ubqln1Q8R317 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.08■□□□□ 0.17
Ubqln1Q8R317 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ubqln1Q8R317 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms