Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Chmp7Q8R1T1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp7Q8R1T1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Chmp7Q8R1T1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Birc2-201ENSMUST00000054878 378 ntBASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp7Q8R1T1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp7Q8R1T1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Gm44771-201ENSMUST00000206975 626 ntBASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.7■■□□□ 1.06
Chmp7Q8R1T1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.69■■□□□ 1.06
Chmp7Q8R1T1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms