Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf7Q8R0S1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf7Q8R0S1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf7Q8R0S1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Atf7Q8R0S1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf7Q8R0S1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atf7Q8R0S1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atf7Q8R0S1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atf7Q8R0S1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atf7Q8R0S1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms