Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Gm26308-201ENSMUST00000157768 69 ntBASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Gm27628-201ENSMUST00000184911 107 ntBASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Gm44430-201ENSMUST00000203376 995 ntBASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.68■□□□□ 0.9
Col23a1Q8K4G2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 AV026068-213ENSMUST00000223675 1171 ntBASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.67■□□□□ 0.9
Col23a1Q8K4G2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col23a1Q8K4G2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col23a1Q8K4G2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col23a1Q8K4G2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col23a1Q8K4G2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Col23a1Q8K4G2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col23a1Q8K4G2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col23a1Q8K4G2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Col23a1Q8K4G2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col23a1Q8K4G2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col23a1Q8K4G2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Col23a1Q8K4G2 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.64■□□□□ 0.89
Col23a1Q8K4G2 Gm10175-201ENSMUST00000086013 645 ntBASIC20.64■□□□□ 0.89
Col23a1Q8K4G2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Col23a1Q8K4G2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.64■□□□□ 0.89
Col23a1Q8K4G2 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Gm13036-201ENSMUST00000117799 748 ntBASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col23a1Q8K4G2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms