Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf39Q8K2Z2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf39Q8K2Z2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf39Q8K2Z2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf39Q8K2Z2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf39Q8K2Z2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Gm11539-201ENSMUST00000119837 557 ntBASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Gm13436-201ENSMUST00000120418 567 ntBASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf39Q8K2Z2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf39Q8K2Z2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Prpf39Q8K2Z2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf39Q8K2Z2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf39Q8K2Z2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Prpf39Q8K2Z2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Prpf39Q8K2Z2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms