Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm13312-201ENSMUST00000119631 718 ntBASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm18195-201ENSMUST00000207604 706 ntBASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.16■□□□□ 0.34
Rtn4rl1Q8K0S5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rl1Q8K0S5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rl1Q8K0S5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Gm6296-201ENSMUST00000222599 943 ntBASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rl1Q8K0S5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Rps4l-201ENSMUST00000071745 943 ntBASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rl1Q8K0S5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Rprl3-201ENSMUST00000157400 290 ntBASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.11■□□□□ 0.33
Rtn4rl1Q8K0S5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms