Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim61Q8JZK6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Mir770-201ENSMUST00000103252 94 ntBASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim61Q8JZK6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim61Q8JZK6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim61Q8JZK6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim61Q8JZK6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim61Q8JZK6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim61Q8JZK6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Gm27357-201ENSMUST00000183754 135 ntBASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim61Q8JZK6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Mir3081-201ENSMUST00000175305 84 ntBASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim61Q8JZK6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim61Q8JZK6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms