Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Gm2756-201ENSMUST00000195851 400 ntBASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Gm6550-201ENSMUST00000187574 993 ntBASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1l1Q8CGM2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rp1l1Q8CGM2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Gm4535-201ENSMUST00000182274 558 ntBASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Gm10355-201ENSMUST00000097146 517 ntBASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1l1Q8CGM2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Gm9727-201ENSMUST00000161387 555 ntBASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Gm15590-201ENSMUST00000078419 552 ntBASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1l1Q8CGM2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms