Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ShfQ8CG80 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ShfQ8CG80 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ShfQ8CG80 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ShfQ8CG80 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
ShfQ8CG80 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ShfQ8CG80 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ShfQ8CG80 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
ShfQ8CG80 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
ShfQ8CG80 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.17■□□□□ 0.02
ShfQ8CG80 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ShfQ8CG80 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.16■□□□□ 0.02
ShfQ8CG80 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.16■□□□□ 0.02
ShfQ8CG80 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ShfQ8CG80 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.16■□□□□ 0.02
ShfQ8CG80 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.16■□□□□ 0.02
ShfQ8CG80 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.16■□□□□ 0.02
ShfQ8CG80 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.16■□□□□ 0.02
ShfQ8CG80 Gm20049-201ENSMUST00000219950 730 ntBASIC15.16■□□□□ 0.02
ShfQ8CG80 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ShfQ8CG80 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ShfQ8CG80 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ShfQ8CG80 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.16■□□□□ 0.02
ShfQ8CG80 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ShfQ8CG80 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ShfQ8CG80 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ShfQ8CG80 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ShfQ8CG80 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.15■□□□□ 0.02
ShfQ8CG80 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ShfQ8CG80 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.15■□□□□ 0.02
ShfQ8CG80 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.15■□□□□ 0.02
ShfQ8CG80 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.15■□□□□ 0.02
ShfQ8CG80 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ShfQ8CG80 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ShfQ8CG80 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ShfQ8CG80 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ShfQ8CG80 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
ShfQ8CG80 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.14■□□□□ 0.01
ShfQ8CG80 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ShfQ8CG80 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms